158 research outputs found
Increasing the Analytical Accessibility of Multishell and Diffusion Spectrum Imaging Data Using Generalized Q-Sampling Conversion
Many diffusion MRI researchers, including the Human Connectome Project (HCP),
acquire data using multishell (e.g., WU-Minn consortium) and diffusion spectrum
imaging (DSI) schemes (e.g., USC-Harvard consortium). However, these data sets
are not readily accessible to high angular resolution diffusion imaging (HARDI)
analysis methods that are popular in connectomics analysis. Here we introduce a
scheme conversion approach that transforms multishell and DSI data into their
corresponding HARDI representations, thereby empowering HARDI-based analytical
methods to make use of data acquired using non-HARDI approaches. This method
was evaluated on both phantom and in-vivo human data sets by acquiring
multishell, DSI, and HARDI data simultaneously, and comparing the converted
HARDI, from non-HARDI methods, with the original HARDI data. Analysis on the
phantom shows that the converted HARDI from DSI and multishell data strongly
predicts the original HARDI (correlation coefficient > 0.9). Our in-vivo study
shows that the converted HARDI can be reconstructed by constrained spherical
deconvolution, and the fiber orientation distributions are consistent with
those from the original HARDI. We further illustrate that our scheme conversion
method can be applied to HCP data, and the converted HARDI do not appear to
sacrifice angular resolution. Thus this novel approach can benefit all
HARDI-based analysis approaches, allowing greater analytical accessibility to
non-HARDI data, including data from the HCP
Mapping Topographic Structure in White Matter Pathways with Level Set Trees
Fiber tractography on diffusion imaging data offers rich potential for
describing white matter pathways in the human brain, but characterizing the
spatial organization in these large and complex data sets remains a challenge.
We show that level set trees---which provide a concise representation of the
hierarchical mode structure of probability density functions---offer a
statistically-principled framework for visualizing and analyzing topography in
fiber streamlines. Using diffusion spectrum imaging data collected on
neurologically healthy controls (N=30), we mapped white matter pathways from
the cortex into the striatum using a deterministic tractography algorithm that
estimates fiber bundles as dimensionless streamlines. Level set trees were used
for interactive exploration of patterns in the endpoint distributions of the
mapped fiber tracks and an efficient segmentation of the tracks that has
empirical accuracy comparable to standard nonparametric clustering methods. We
show that level set trees can also be generalized to model pseudo-density
functions in order to analyze a broader array of data types, including entire
fiber streamlines. Finally, resampling methods show the reliability of the
level set tree as a descriptive measure of topographic structure, illustrating
its potential as a statistical descriptor in brain imaging analysis. These
results highlight the broad applicability of level set trees for visualizing
and analyzing high-dimensional data like fiber tractography output
Binding During Sequence Learning Does Not Alter Cortical Representations of Individual Actions
Copyright © 2019 the authors. As a sequence of movements is learned, serially ordered actions get bound together into sets to reduce computational complexity during planning and execution. Here, we investigated how actions become naturally bound over the course of learning and how this learning affects cortical representations of individual actions. Across 5 weeks of practice, neurologically healthy human subjects learned either a complex 32-item sequence of finger movements (trained group, n = 9; 3 female) or randomly ordered actions (control group, n = 9; 3 female). Over the course of practice, responses during sequence production in the trained group became temporally correlated, consistent with responses being bound together under a common command. These behavioral changes, however, did not coincide with plasticity in the multivariate representations of individual finger movements, assessed using fMRI, at any level of the cortical motor hierarchy. This suggests that the representations of individual actions remain stable, even as the execution of those same actions become bound together in the context of producing a well learned sequence.SIGNIFICANCE STATEMENT Extended practice on motor sequences results in highly stereotyped movement patterns that bind successive movements together. This binding is critical for skilled motor performance, yet it is not currently understood how it is achieved in the brain. We examined how binding altered the patterns of activity associated with individual movements that make up the sequence. We found that fine finger control during sequence production involved correlated activity throughout multiple motor regions; however, we found no evidence for plasticity of the representations of elementary movements. This suggests that binding is associated with plasticity at a more abstract level of the motor hierarchy
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